Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sirpb1aA0A0A6YYP6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.9■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sirpb1aA0A0A6YYP6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sirpb1aA0A0A6YYP6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.87■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.87■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sirpb1aA0A0A6YYP6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.83■□□□□ 0.93
Sirpb1aA0A0A6YYP6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.79■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.79■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sirpb1aA0A0A6YYP6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sirpb1aA0A0A6YYP6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.75■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.74■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sirpb1aA0A0A6YYP6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms