Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Gm11599-201ENSMUST00000118720 878 ntBASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-36A0A0A6YXT2 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.96■□□□□ 0.46
Ighv1-36A0A0A6YXT2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Terc-201ENSMUST00000082862 423 ntBASIC17.94■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.9■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-36A0A0A6YXT2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-36A0A0A6YXT2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-36A0A0A6YXT2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.84■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ighv1-36A0A0A6YXT2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.83■□□□□ 0.44
Ighv1-36A0A0A6YXT2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-36A0A0A6YXT2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms