Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-20A0A0A6YX66 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.89■□□□□ 0.45
Ighv1-20A0A0A6YX66 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-20A0A0A6YX66 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-20A0A0A6YX66 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-20A0A0A6YX66 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.87■□□□□ 0.45
Ighv1-20A0A0A6YX66 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gm5921-201ENSMUST00000075898 882 ntBASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-20A0A0A6YX66 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-20A0A0A6YX66 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-20A0A0A6YX66 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-20A0A0A6YX66 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ighv1-20A0A0A6YX66 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Ighv1-20A0A0A6YX66 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-20A0A0A6YX66 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-20A0A0A6YX66 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-20A0A0A6YX66 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-20A0A0A6YX66 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-20A0A0A6YX66 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-20A0A0A6YX66 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-20A0A0A6YX66 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-20A0A0A6YX66 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-20A0A0A6YX66 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ighv1-20A0A0A6YX66 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-20A0A0A6YX66 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-20A0A0A6YX66 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-20A0A0A6YX66 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ighv1-20A0A0A6YX66 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-20A0A0A6YX66 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-20A0A0A6YX66 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms