Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13-4-dv7A0A075B6C2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.09■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13-4-dv7A0A075B6C2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-4-dv7A0A075B6C2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav13-4-dv7A0A075B6C2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13-4-dv7A0A075B6C2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-4-dv7A0A075B6C2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-4-dv7A0A075B6C2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13-4-dv7A0A075B6C2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13-4-dv7A0A075B6C2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.07■□□□□ 0
Trav13-4-dv7A0A075B6C2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13-4-dv7A0A075B6C2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13-4-dv7A0A075B6C2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13-4-dv7A0A075B6C2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav13-4-dv7A0A075B6C2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13-4-dv7A0A075B6C2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms