Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Gm11599-201ENSMUST00000118720 878 ntBASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav9-1A0A075B601 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Gm9812-201ENSMUST00000061934 968 ntBASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9-1A0A075B601 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Gm45364-201ENSMUST00000210883 159 ntBASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9-1A0A075B601 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9-1A0A075B601 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9-1A0A075B601 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9-1A0A075B601 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.14■□□□□ 0.34
Trav9-1A0A075B601 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav9-1A0A075B601 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-1A0A075B601 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-1A0A075B601 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav9-1A0A075B601 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav9-1A0A075B601 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-1A0A075B601 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-1A0A075B601 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-1A0A075B601 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-1A0A075B601 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav9-1A0A075B601 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav9-1A0A075B601 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-1A0A075B601 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-1A0A075B601 Terc-201ENSMUST00000082862 423 ntBASIC17.1■□□□□ 0.33
Trav9-1A0A075B601 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav9-1A0A075B601 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav9-1A0A075B601 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav9-1A0A075B601 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms