Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb3S4R1G7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.13□□□□□ -0.31
H2afb3S4R1G7 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.13□□□□□ -0.31
H2afb3S4R1G7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb3S4R1G7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Gm4899-201ENSMUST00000178708 719 ntBASIC13.12□□□□□ -0.31
H2afb3S4R1G7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Gm28659-201ENSMUST00000188013 759 ntBASIC13.12□□□□□ -0.31
H2afb3S4R1G7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb3S4R1G7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.12□□□□□ -0.31
H2afb3S4R1G7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm17971-201ENSMUST00000190239 806 ntBASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm5864-201ENSMUST00000202263 970 ntBASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms