Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Clcn2Q9R0A1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gm8000-201ENSMUST00000188378 592 ntBASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Clcn2Q9R0A1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gm12260-201ENSMUST00000122447 411 ntBASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gm10175-201ENSMUST00000086013 645 ntBASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clcn2Q9R0A1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.89□□□□□ -0.03
Clcn2Q9R0A1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn2Q9R0A1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms