Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a4Q9QZR9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.27□□□□□ -0.13
Col4a4Q9QZR9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Gm25927-201ENSMUST00000175058 117 ntBASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col4a4Q9QZR9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm6082-201ENSMUST00000215204 454 ntBASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col4a4Q9QZR9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms