Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Six6Q9QZ28 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.35□□□□□ -0.43
Six6Q9QZ28 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.35□□□□□ -0.43
Six6Q9QZ28 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.35□□□□□ -0.43
Six6Q9QZ28 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six6Q9QZ28 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.34□□□□□ -0.43
Six6Q9QZ28 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.34□□□□□ -0.43
Six6Q9QZ28 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.34□□□□□ -0.43
Six6Q9QZ28 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.34□□□□□ -0.43
Six6Q9QZ28 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Six6Q9QZ28 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six6Q9QZ28 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six6Q9QZ28 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.33□□□□□ -0.44
Six6Q9QZ28 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.33□□□□□ -0.44
Six6Q9QZ28 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms