Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a2Q9JLR1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sec61a2Q9JLR1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a2Q9JLR1 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a2Q9JLR1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Gm12008-201ENSMUST00000117791 755 ntBASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms