Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Mir3102-201ENSMUST00000175555 104 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Gm18827-201ENSMUST00000188341 790 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-4Q9EQM3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm2495-201ENSMUST00000191160 466 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm6091-201ENSMUST00000098307 165 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-4Q9EQM3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nkx2-4Q9EQM3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-4Q9EQM3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Gm11814-201ENSMUST00000119515 929 ntBASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms