Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmg20aQ9DC33 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmg20aQ9DC33 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Mir6982-201ENSMUST00000184354 68 ntBASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmg20aQ9DC33 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmg20aQ9DC33 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Gm6433-201ENSMUST00000118634 875 ntBASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmg20aQ9DC33 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmg20aQ9DC33 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmg20aQ9DC33 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmg20aQ9DC33 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms