Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssmem1Q9D9Y8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.59□□□□□ -0.39
Ssmem1Q9D9Y8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssmem1Q9D9Y8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssmem1Q9D9Y8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ssmem1Q9D9Y8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms