Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm28599-201ENSMUST00000189838 694 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21867-201ENSMUST00000189917 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm29269-201ENSMUST00000190087 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21722-201ENSMUST00000190153 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm28423-201ENSMUST00000190701 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21899-201ENSMUST00000190745 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21910-201ENSMUST00000191163 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21849-201ENSMUST00000191571 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm28678-201ENSMUST00000191593 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm20910-201ENSMUST00000193268 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Gm21871-201ENSMUST00000194621 696 ntBASIC19.15■□□□□ 0.66
U2af1Q9D883 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.15■□□□□ 0.66
U2af1Q9D883 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1Q9D883 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
U2af1Q9D883 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
U2af1Q9D883 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
U2af1Q9D883 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.14■□□□□ 0.65
U2af1Q9D883 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.14■□□□□ 0.65
U2af1Q9D883 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.14■□□□□ 0.65
U2af1Q9D883 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.14■□□□□ 0.65
U2af1Q9D883 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1Q9D883 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm13223-201ENSMUST00000118609 747 ntBASIC19.13■□□□□ 0.65
U2af1Q9D883 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Gm27622-201ENSMUST00000183779 60 ntBASIC19.13■□□□□ 0.65
U2af1Q9D883 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
U2af1Q9D883 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1Q9D883 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
U2af1Q9D883 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
U2af1Q9D883 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
U2af1Q9D883 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
U2af1Q9D883 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
U2af1Q9D883 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
U2af1Q9D883 Gm9252-201ENSMUST00000172364 1602 ntBASIC19.11■□□□□ 0.65
U2af1Q9D883 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms