Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm26095-201ENSMUST00000179270 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22171-201ENSMUST00000179283 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm23936-201ENSMUST00000179354 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22619-201ENSMUST00000179516 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25255-201ENSMUST00000179579 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24755-201ENSMUST00000179691 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm26506-201ENSMUST00000179692 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25086-201ENSMUST00000179931 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm23243-201ENSMUST00000180047 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24659-201ENSMUST00000180212 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24169-201ENSMUST00000180244 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm23689-201ENSMUST00000180354 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27920-201ENSMUST00000183953 96 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27359-201ENSMUST00000184153 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27785-201ENSMUST00000184268 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27466-201ENSMUST00000184396 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm27703-201ENSMUST00000184836 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Mir449b-201ENSMUST00000104833 80 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Gm44872-201ENSMUST00000207864 420 ntBASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ssbp3Q9D032 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ssbp3Q9D032 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssbp3Q9D032 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ssbp3Q9D032 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ssbp3Q9D032 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Gm25948-201ENSMUST00000175334 112 ntBASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ssbp3Q9D032 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms