Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Gm8749-201ENSMUST00000117737 331 ntBASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Gm7506-201ENSMUST00000207758 815 ntBASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Raet1eQ9CZQ6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm18041-201ENSMUST00000218210 618 ntBASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Raet1eQ9CZQ6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm6433-201ENSMUST00000118634 875 ntBASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm17808-201ENSMUST00000200859 894 ntBASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Raet1eQ9CZQ6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms