Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gm27357-201ENSMUST00000183754 135 ntBASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim13Q9CYB0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Gm10819-201ENSMUST00000099988 561 ntBASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim13Q9CYB0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Gm17807-201ENSMUST00000186869 298 ntBASIC13.47□□□□□ -0.25
Trim13Q9CYB0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim13Q9CYB0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim13Q9CYB0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim13Q9CYB0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 305.3 ms