Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssu72Q9CY97 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm7284-201ENSMUST00000131667 944 ntBASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssu72Q9CY97 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ssu72Q9CY97 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gm7222-201ENSMUST00000117512 906 ntBASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gm8584-201ENSMUST00000171982 758 ntBASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Matn2-206ENSMUST00000228570 2798 ntBASIC14.45□□□□□ -0.1
Ssu72Q9CY97 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssu72Q9CY97 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm25990-201ENSMUST00000102440 86 ntBASIC14.44□□□□□ -0.1
Ssu72Q9CY97 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.44□□□□□ -0.1
Ssu72Q9CY97 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms