Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nip7Q9CXK8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.05■□□□□ 0.48
Nip7Q9CXK8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nip7Q9CXK8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.04■□□□□ 0.48
Nip7Q9CXK8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.04■□□□□ 0.48
Nip7Q9CXK8 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nip7Q9CXK8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nip7Q9CXK8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms