Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Gm27300-201ENSMUST00000184085 97 ntBASIC17.15■□□□□ 0.34
Smc3Q9CW03 Gm27335-201ENSMUST00000184758 97 ntBASIC17.15■□□□□ 0.34
Smc3Q9CW03 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.15■□□□□ 0.34
Smc3Q9CW03 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smc3Q9CW03 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Smc3Q9CW03 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Gm13884-201ENSMUST00000118103 829 ntBASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.14■□□□□ 0.33
Smc3Q9CW03 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Gm15590-201ENSMUST00000078419 552 ntBASIC17.14■□□□□ 0.33
Smc3Q9CW03 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc3Q9CW03 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.13■□□□□ 0.33
Smc3Q9CW03 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.13■□□□□ 0.33
Smc3Q9CW03 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.13■□□□□ 0.33
Smc3Q9CW03 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smc3Q9CW03 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc3Q9CW03 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.12■□□□□ 0.33
Smc3Q9CW03 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm27628-201ENSMUST00000184911 107 ntBASIC17.12■□□□□ 0.33
Smc3Q9CW03 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Gm28659-201ENSMUST00000188013 759 ntBASIC17.12■□□□□ 0.33
Smc3Q9CW03 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms