Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d3Q9CSV6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Gm14701-201ENSMUST00000117156 348 ntBASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sft2d3Q9CSV6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sft2d3Q9CSV6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.42□□□□□ -0.42
Sft2d3Q9CSV6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms