Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim8Q99PJ2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gm28659-201ENSMUST00000188013 759 ntBASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gm37153-201ENSMUST00000193637 231 ntBASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim8Q99PJ2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Matn2-206ENSMUST00000228570 2798 ntBASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim8Q99PJ2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim8Q99PJ2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Mir8098-201ENSMUST00000184011 137 ntBASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim8Q99PJ2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms