Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.43□□□□□ -0.42
Smim3Q99PE5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.43□□□□□ -0.42
Smim3Q99PE5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim3Q99PE5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Gm8318-201ENSMUST00000182954 872 ntBASIC12.42□□□□□ -0.42
Smim3Q99PE5 Gm8520-201ENSMUST00000186517 868 ntBASIC12.42□□□□□ -0.42
Smim3Q99PE5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.42□□□□□ -0.42
Smim3Q99PE5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim3Q99PE5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm6623-201ENSMUST00000173570 544 ntBASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm22697-201ENSMUST00000175194 63 ntBASIC12.41□□□□□ -0.42
Smim3Q99PE5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.41□□□□□ -0.42
Smim3Q99PE5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.41□□□□□ -0.42
Smim3Q99PE5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.41□□□□□ -0.42
Smim3Q99PE5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim3Q99PE5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms