Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Mir6956-201ENSMUST00000183598 62 ntBASIC18.76■□□□□ 0.59
Rtn4Q99P72 Gm28439-201ENSMUST00000187714 876 ntBASIC18.76■□□□□ 0.59
Rtn4Q99P72 Gm38000-201ENSMUST00000192390 1215 ntBASIC18.76■□□□□ 0.59
Rtn4Q99P72 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtn4Q99P72 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC18.76■□□□□ 0.59
Rtn4Q99P72 Gm8396-201ENSMUST00000057361 823 ntBASIC18.76■□□□□ 0.59
Rtn4Q99P72 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtn4Q99P72 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm11893-201ENSMUST00000117829 491 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm14722-201ENSMUST00000118943 689 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm43124-201ENSMUST00000201878 278 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.75■□□□□ 0.59
Rtn4Q99P72 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rtn4Q99P72 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Gm13616-201ENSMUST00000120600 222 ntBASIC18.74■□□□□ 0.59
Rtn4Q99P72 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Gm5178-201ENSMUST00000219380 898 ntBASIC18.74■□□□□ 0.59
Rtn4Q99P72 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rtn4Q99P72 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtn4Q99P72 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Rprl2-201ENSMUST00000157150 290 ntBASIC18.73■□□□□ 0.59
Rtn4Q99P72 Gm5656-201ENSMUST00000171020 1096 ntBASIC18.73■□□□□ 0.59
Rtn4Q99P72 Gm21139-201ENSMUST00000186594 877 ntBASIC18.73■□□□□ 0.59
Rtn4Q99P72 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rtn4Q99P72 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms