Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Mir6392-201ENSMUST00000184924 108 ntBASIC14.56□□□□□ -0.08
Cstf1Q99LC2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Gm16476-201ENSMUST00000221544 139 ntBASIC14.56□□□□□ -0.08
Cstf1Q99LC2 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cstf1Q99LC2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm15806-201ENSMUST00000120696 955 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm5479-201ENSMUST00000160578 435 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm28760-201ENSMUST00000185995 736 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Gm18624-201ENSMUST00000220966 658 ntBASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cstf1Q99LC2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm11425-201ENSMUST00000119608 498 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm10766-202ENSMUST00000194123 606 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 AY702102-202ENSMUST00000194651 1173 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Dupd1-202ENSMUST00000224735 548 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm9797-201ENSMUST00000052902 613 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm9396-201ENSMUST00000076703 567 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.54□□□□□ -0.08
Cstf1Q99LC2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms