Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm2272-201ENSMUST00000194903 582 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lims1Q99JW4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.29□□□□□ -0.28
Lims1Q99JW4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lims1Q99JW4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.28□□□□□ -0.28
Lims1Q99JW4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Gm11452-201ENSMUST00000122376 690 ntBASIC13.28□□□□□ -0.28
Lims1Q99JW4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lims1Q99JW4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.27□□□□□ -0.28
Lims1Q99JW4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lims1Q99JW4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Gm27300-201ENSMUST00000184085 97 ntBASIC13.27□□□□□ -0.29
Lims1Q99JW4 Gm27335-201ENSMUST00000184758 97 ntBASIC13.27□□□□□ -0.29
Lims1Q99JW4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.27□□□□□ -0.29
Lims1Q99JW4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.27□□□□□ -0.29
Lims1Q99JW4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lims1Q99JW4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lims1Q99JW4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms