Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Thumpd1Q99J36 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Thumpd1Q99J36 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13□□□□□ -0.33
Thumpd1Q99J36 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13□□□□□ -0.33
Thumpd1Q99J36 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 AC159106.1-201ENSMUST00000224421 690 ntBASIC13□□□□□ -0.33
Thumpd1Q99J36 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd1Q99J36 Gm19863-201ENSMUST00000192480 2218 ntBASIC13□□□□□ -0.33
Thumpd1Q99J36 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Thumpd1Q99J36 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Gm7787-201ENSMUST00000216858 688 ntBASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd1Q99J36 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd1Q99J36 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms