Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdha3Q91Y16 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm11543-201ENSMUST00000120758 370 ntBASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm11745-201ENSMUST00000121669 448 ntBASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm20553-201ENSMUST00000204205 844 ntBASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm18057-201ENSMUST00000208220 503 ntBASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdha3Q91Y16 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Gm8749-201ENSMUST00000117737 331 ntBASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdha3Q91Y16 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms