Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.12■□□□□ 0.33
Pcdhb5Q91XZ5 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm23984-201ENSMUST00000157139 203 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm21854-201ENSMUST00000179901 471 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm6745-201ENSMUST00000199216 526 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb5Q91XZ5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gm33320-201ENSMUST00000192232 530 ntBASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gm9797-201ENSMUST00000052902 613 ntBASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb5Q91XZ5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms