Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Pcdhb6Q91XZ4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb6Q91XZ4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Pcdhb6Q91XZ4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb6Q91XZ4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.96□□□□□ -0.02
Pcdhb6Q91XZ4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Pcdhb6Q91XZ4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb6Q91XZ4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gm18737-201ENSMUST00000173594 937 ntBASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms