Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga4Q91XY4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhga4Q91XY4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Rpph1-201ENSMUST00000175096 319 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Chchd1-203ENSMUST00000224633 557 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.35□□□□□ -0.11
Pcdhga4Q91XY4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms