Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3d19Q91X43 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm14767-201ENSMUST00000121559 586 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm16476-201ENSMUST00000221544 139 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm9063-201ENSMUST00000223299 582 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Shd-206ENSMUST00000225145 998 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3d19Q91X43 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm45453-201ENSMUST00000211758 853 ntBASIC15.15■□□□□ 0.02
Sh3d19Q91X43 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Carlr-201ENSMUST00000181515 2574 ntBASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh3d19Q91X43 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sh3d19Q91X43 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms