Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps4aQ8VEJ9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps4aQ8VEJ9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vps4aQ8VEJ9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Mir1895-201ENSMUST00000122615 79 ntBASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms