Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm16198-201ENSMUST00000118766 670 ntBASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm12350-201ENSMUST00000121208 462 ntBASIC13.98□□□□□ -0.17
Lsm1Q8VC85 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm1Q8VC85 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm18195-201ENSMUST00000207604 706 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm10154-201ENSMUST00000084445 354 ntBASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm1Q8VC85 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms