Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cd109Q8R422 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.48■□□□□ 0.87
Cd109Q8R422 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Gm15240-201ENSMUST00000118156 720 ntBASIC20.48■□□□□ 0.87
Cd109Q8R422 Gm8602-201ENSMUST00000184045 607 ntBASIC20.48■□□□□ 0.87
Cd109Q8R422 Gm27701-201ENSMUST00000184498 110 ntBASIC20.48■□□□□ 0.87
Cd109Q8R422 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cd109Q8R422 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd109Q8R422 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC20.47■□□□□ 0.87
Cd109Q8R422 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC20.47■□□□□ 0.87
Cd109Q8R422 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cd109Q8R422 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC20.47■□□□□ 0.87
Cd109Q8R422 Gm37748-201ENSMUST00000194379 1140 ntBASIC20.47■□□□□ 0.87
Cd109Q8R422 Gm5425-201ENSMUST00000214125 459 ntBASIC20.47■□□□□ 0.87
Cd109Q8R422 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Gm25857-201ENSMUST00000082788 129 ntBASIC20.47■□□□□ 0.87
Cd109Q8R422 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd109Q8R422 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Gm4804-201ENSMUST00000182234 999 ntBASIC20.46■□□□□ 0.87
Cd109Q8R422 Mir7654-201ENSMUST00000185082 70 ntBASIC20.46■□□□□ 0.87
Cd109Q8R422 Gm37714-201ENSMUST00000194742 342 ntBASIC20.46■□□□□ 0.87
Cd109Q8R422 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Efs-202ENSMUST00000227037 2540 ntBASIC20.46■□□□□ 0.87
Cd109Q8R422 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd109Q8R422 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd109Q8R422 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.45■□□□□ 0.86
Cd109Q8R422 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.45■□□□□ 0.86
Cd109Q8R422 Gm17795-201ENSMUST00000214505 757 ntBASIC20.45■□□□□ 0.86
Cd109Q8R422 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.45■□□□□ 0.86
Cd109Q8R422 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cd109Q8R422 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Cd109Q8R422 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.45■□□□□ 0.86
Cd109Q8R422 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.45■□□□□ 0.86
Cd109Q8R422 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd109Q8R422 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.44■□□□□ 0.86
Cd109Q8R422 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.44■□□□□ 0.86
Cd109Q8R422 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms