Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm26308-201ENSMUST00000157768 69 ntBASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Gm43125-201ENSMUST00000201724 730 ntBASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sf3a1Q8K4Z5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sf3a1Q8K4Z5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sf3a1Q8K4Z5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sf3a1Q8K4Z5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sf3a1Q8K4Z5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sf3a1Q8K4Z5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Gm43474-201ENSMUST00000196415 774 ntBASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sf3a1Q8K4Z5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sf3a1Q8K4Z5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gm38225-201ENSMUST00000194001 393 ntBASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sf3a1Q8K4Z5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms