Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Gm3786-201ENSMUST00000202659 378 ntBASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx54Q8K4L0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm7584-201ENSMUST00000175829 940 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm27514-201ENSMUST00000183692 110 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm4857-201ENSMUST00000192718 785 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm9823-201ENSMUST00000051212 327 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx54Q8K4L0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Gm10327-201ENSMUST00000105222 1002 ntBASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx54Q8K4L0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx54Q8K4L0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx54Q8K4L0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Gm13350-201ENSMUST00000120519 479 ntBASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Mir8109-201ENSMUST00000184375 117 ntBASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms