Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.18□□□□□ -0.94
Cystm1Q8K353 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.18□□□□□ -0.94
Cystm1Q8K353 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Gm18195-201ENSMUST00000207604 706 ntBASIC9.18□□□□□ -0.94
Cystm1Q8K353 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.18□□□□□ -0.94
Cystm1Q8K353 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Gm43347-201ENSMUST00000200226 580 ntBASIC9.17□□□□□ -0.94
Cystm1Q8K353 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cystm1Q8K353 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms