Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.26■□□□□ 0.35
Cchcr1Q8K2I2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Gm9182-201ENSMUST00000217829 639 ntBASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cchcr1Q8K2I2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cchcr1Q8K2I2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Gm5177-201ENSMUST00000183092 997 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.23■□□□□ 0.35
Cchcr1Q8K2I2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms