Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Gm44335-201ENSMUST00000196879 141 ntBASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Gm44297-201ENSMUST00000198304 141 ntBASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Gm44346-201ENSMUST00000198851 141 ntBASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Chchd1-203ENSMUST00000224633 557 ntBASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rtn1Q8K0T0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Mir6990-201ENSMUST00000183724 91 ntBASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rtn1Q8K0T0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Gm43575-201ENSMUST00000196420 516 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms