Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm8410-201ENSMUST00000117225 605 ntBASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rbm28Q8CGC6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.22■□□□□ 0.35
Rbm28Q8CGC6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.21■□□□□ 0.35
Rbm28Q8CGC6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rbm28Q8CGC6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rbm28Q8CGC6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Gm38294-201ENSMUST00000192831 381 ntBASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Efs-202ENSMUST00000227037 2540 ntBASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms