Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Gm18624-201ENSMUST00000220966 658 ntBASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim52Q8CDV4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Gm21470-201ENSMUST00000187680 696 ntBASIC17.89■□□□□ 0.45
Trim52Q8CDV4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim52Q8CDV4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Gm12138-201ENSMUST00000122180 951 ntBASIC17.88■□□□□ 0.45
Trim52Q8CDV4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim52Q8CDV4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm44608-201ENSMUST00000206827 855 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm9908-201ENSMUST00000211534 448 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim52Q8CDV4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms