Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim9Q8C7M3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim9Q8C7M3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Gm11543-201ENSMUST00000120758 370 ntBASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.06■□□□□ 0.16
Trim9Q8C7M3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.06■□□□□ 0.16
Trim9Q8C7M3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim9Q8C7M3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm11745-201ENSMUST00000121669 448 ntBASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm18057-201ENSMUST00000208220 503 ntBASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim9Q8C7M3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim9Q8C7M3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms