Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc60Q8C4J0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Gm37297-201ENSMUST00000192974 2384 ntBASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc60Q8C4J0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm25287-201ENSMUST00000103846 110 ntBASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm22918-201ENSMUST00000103855 110 ntBASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm23547-201ENSMUST00000158210 271 ntBASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc60Q8C4J0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Gm13015-201ENSMUST00000118674 204 ntBASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Gm8396-201ENSMUST00000057361 823 ntBASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms