Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rft1Q8C3B8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rft1Q8C3B8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Gm43514-201ENSMUST00000198852 424 ntBASIC13.02□□□□□ -0.33
Rft1Q8C3B8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rft1Q8C3B8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.02□□□□□ -0.33
Rft1Q8C3B8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rft1Q8C3B8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Gm13036-201ENSMUST00000117799 748 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms