Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm15427-201ENSMUST00000117288 531 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm25911-201ENSMUST00000157621 56 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm8000-201ENSMUST00000188378 592 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm2451-201ENSMUST00000199447 999 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gm10290-201ENSMUST00000200451 999 ntBASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.2■□□□□ 0.02
Sh3rf3Q8C120 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm23547-201ENSMUST00000158210 271 ntBASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm9726-201ENSMUST00000180321 678 ntBASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm43514-201ENSMUST00000198852 424 ntBASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf3Q8C120 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf3Q8C120 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.17■□□□□ 0.02
Sh3rf3Q8C120 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms