Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Gm12008-201ENSMUST00000117791 755 ntBASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Chchd1-203ENSMUST00000224633 557 ntBASIC12.97□□□□□ -0.33
Ube3dQ8BX13 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube3dQ8BX13 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Gm15427-201ENSMUST00000117288 531 ntBASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ube3dQ8BX13 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ube3dQ8BX13 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.96□□□□□ -0.34
Ube3dQ8BX13 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Gm11434-201ENSMUST00000122379 629 ntBASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ube3dQ8BX13 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ube3dQ8BX13 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms