Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm29310-201ENSMUST00000185468 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21825-201ENSMUST00000185728 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm29109-201ENSMUST00000185895 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21896-201ENSMUST00000186520 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21873-201ENSMUST00000186728 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21794-201ENSMUST00000187056 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21880-201ENSMUST00000187275 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21826-201ENSMUST00000187451 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21198-201ENSMUST00000188393 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21749-201ENSMUST00000189343 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21901-201ENSMUST00000189568 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm29424-201ENSMUST00000189716 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm28599-201ENSMUST00000189838 694 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21867-201ENSMUST00000189917 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm29269-201ENSMUST00000190087 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21722-201ENSMUST00000190153 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm28423-201ENSMUST00000190701 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21899-201ENSMUST00000190745 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21910-201ENSMUST00000191163 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21849-201ENSMUST00000191571 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm28678-201ENSMUST00000191593 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm20910-201ENSMUST00000193268 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Gm21871-201ENSMUST00000194621 696 ntBASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup54Q8BTS4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Mir6956-201ENSMUST00000183598 62 ntBASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup54Q8BTS4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup54Q8BTS4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms