Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ppp1r3eQ8BRJ4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm14042-201ENSMUST00000120139 833 ntBASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Mir5131-201ENSMUST00000175426 93 ntBASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm18246-201ENSMUST00000221023 728 ntBASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm1401-201ENSMUST00000122048 772 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm8000-201ENSMUST00000188378 592 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm2451-201ENSMUST00000199447 999 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm10290-201ENSMUST00000200451 999 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm6376-201ENSMUST00000209407 580 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Rps4l-201ENSMUST00000071745 943 ntBASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ppp1r3eQ8BRJ4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms