Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Smco3Q8BQM7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Gm10013-201ENSMUST00000106074 672 ntBASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Gm15039-201ENSMUST00000118914 875 ntBASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Gm8344-201ENSMUST00000119813 856 ntBASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smco3Q8BQM7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gm12008-201ENSMUST00000117791 755 ntBASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gm13312-201ENSMUST00000119631 718 ntBASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smco3Q8BQM7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12□□□□□ -0.49
Smco3Q8BQM7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12□□□□□ -0.49
Smco3Q8BQM7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Smco3Q8BQM7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Gm11950-201ENSMUST00000121615 838 ntBASIC12□□□□□ -0.49
Smco3Q8BQM7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smco3Q8BQM7 AC158538.2-201ENSMUST00000225455 906 ntBASIC12□□□□□ -0.49
Smco3Q8BQM7 Vti1a-206ENSMUST00000225529 1244 ntBASIC12□□□□□ -0.49
Smco3Q8BQM7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12□□□□□ -0.49
Smco3Q8BQM7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12□□□□□ -0.49
Smco3Q8BQM7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smco3Q8BQM7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms